The role of host genetic factors in respiratory tract infectious diseases: systematic review, meta-analyses and field synopsis
Identifieur interne : 001215 ( Main/Exploration ); précédent : 001214; suivant : 001216The role of host genetic factors in respiratory tract infectious diseases: systematic review, meta-analyses and field synopsis
Auteurs : Inga Patar I [Croatie] ; Andrea Gelemanovi [Croatie] ; Mirna Kirin [Croatie] ; Ivana Kol I [Croatie] ; Evropi Theodoratou [Royaume-Uni] ; Kenneth J. Baillie [Royaume-Uni] ; Menno D. De Jong [Pays-Bas] ; Igor Rudan [Royaume-Uni] ; Harry Campbell [Royaume-Uni] ; Ozren Polašek [Croatie, Royaume-Uni]Source :
- Scientific Reports [ 2045-2322 ] ; 2015.
Descripteurs français
- KwdFr :
- Bases de données factuelles, Chimiokine CCL2 (génétique), Humains, Infections de l'appareil respiratoire (anatomopathologie), Infections de l'appareil respiratoire (génétique), Infections de l'appareil respiratoire (métabolisme), Interleukine-4 (génétique), Polymorphisme de nucléotide simple, Récepteur de type Toll-2 (génétique), Tuberculose (anatomopathologie), Tuberculose (génétique), Tuberculose (mortalité).
- MESH :
- anatomopathologie : Infections de l'appareil respiratoire, Tuberculose.
- génétique : Chimiokine CCL2, Infections de l'appareil respiratoire, Interleukine-4, Récepteur de type Toll-2, Tuberculose.
- mortalité : Tuberculose.
- métabolisme : Infections de l'appareil respiratoire.
- Bases de données factuelles, Humains, Polymorphisme de nucléotide simple.
English descriptors
- KwdEn :
- Chemokine CCL2 (genetics), Databases, Factual, Humans, Interleukin-4 (genetics), Polymorphism, Single Nucleotide, Respiratory Tract Infections (genetics), Respiratory Tract Infections (metabolism), Respiratory Tract Infections (pathology), Toll-Like Receptor 2 (genetics), Tuberculosis (genetics), Tuberculosis (mortality), Tuberculosis (pathology).
- MESH :
- chemical , genetics : Chemokine CCL2, Interleukin-4, Toll-Like Receptor 2.
- genetics : Respiratory Tract Infections, Tuberculosis.
- metabolism : Respiratory Tract Infections.
- mortality : Tuberculosis.
- pathology : Respiratory Tract Infections, Tuberculosis.
- Databases, Factual, Humans, Polymorphism, Single Nucleotide.
Abstract
Host genetic factors have frequently been implicated in respiratory infectious diseases, often with inconsistent results in replication studies. We identified 386 studies from the total of 24,823 studies identified in a systematic search of four bibliographic databases. We performed meta-analyses of studies on tuberculosis, influenza, respiratory syncytial virus, SARS-Coronavirus and pneumonia. One single-nucleotide polymorphism from
The online version of this article (doi:10.1038/srep16119) contains supplementary material, which is available to authorized users.
Url:
DOI: 10.1038/srep16119
PubMed: 26524966
PubMed Central: 4630784
Affiliations:
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wicri:level="1"><nlm:aff id="Aff1"><institution-wrap><institution-id institution-id-type="GRID">grid.38603.3e</institution-id><institution-id institution-id-type="ISNI">0000 0004 0644 1675</institution-id><institution>Department of Public Health,</institution><institution>University of Split School of Medicine,</institution></institution-wrap>Split, Croatia</nlm:aff><country xml:lang="fr">Croatie</country><wicri:regionArea>Split</wicri:regionArea></affiliation><affiliation wicri:level="1"><nlm:aff id="Aff2"><institution-wrap><institution-id institution-id-type="GRID">grid.4305.2</institution-id><institution-id institution-id-type="ISNI">0000 0004 1936 7988</institution-id><institution>Centre for Global Health Research, Usher Institute of Population Health Sciences and Informatics , University of Edinburgh,</institution></institution-wrap>Edinburgh, UK</nlm:aff><country xml:lang="fr">Royaume-Uni</country><wicri:regionArea>Edinburgh</wicri:regionArea></affiliation></author></analytic><series><title level="j">Scientific Reports</title><idno type="eISSN">2045-2322</idno><imprint><date when="2015">2015</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Chemokine CCL2 (genetics)</term><term>Databases, Factual</term><term>Humans</term><term>Interleukin-4 (genetics)</term><term>Polymorphism, Single Nucleotide</term><term>Respiratory Tract Infections (genetics)</term><term>Respiratory Tract Infections (metabolism)</term><term>Respiratory Tract Infections (pathology)</term><term>Toll-Like Receptor 2 (genetics)</term><term>Tuberculosis (genetics)</term><term>Tuberculosis (mortality)</term><term>Tuberculosis (pathology)</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>Bases de données factuelles</term><term>Chimiokine CCL2 (génétique)</term><term>Humains</term><term>Infections de l'appareil respiratoire (anatomopathologie)</term><term>Infections de l'appareil respiratoire (génétique)</term><term>Infections de l'appareil respiratoire (métabolisme)</term><term>Interleukine-4 (génétique)</term><term>Polymorphisme de nucléotide simple</term><term>Récepteur de type Toll-2 (génétique)</term><term>Tuberculose (anatomopathologie)</term><term>Tuberculose (génétique)</term><term>Tuberculose (mortalité)</term></keywords><keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en"><term>Chemokine CCL2</term><term>Interleukin-4</term><term>Toll-Like Receptor 2</term></keywords><keywords scheme="MESH" qualifier="anatomopathologie" xml:lang="fr"><term>Infections de l'appareil respiratoire</term><term>Tuberculose</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Respiratory Tract Infections</term><term>Tuberculosis</term></keywords><keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>Chimiokine CCL2</term><term>Infections de l'appareil respiratoire</term><term>Interleukine-4</term><term>Récepteur de type Toll-2</term><term>Tuberculose</term></keywords><keywords scheme="MESH" qualifier="metabolism" xml:lang="en"><term>Respiratory Tract Infections</term></keywords><keywords scheme="MESH" qualifier="mortality" xml:lang="en"><term>Tuberculosis</term></keywords><keywords scheme="MESH" qualifier="mortalité" xml:lang="fr"><term>Tuberculose</term></keywords><keywords scheme="MESH" qualifier="métabolisme" xml:lang="fr"><term>Infections de l'appareil respiratoire</term></keywords><keywords scheme="MESH" qualifier="pathology" xml:lang="en"><term>Respiratory Tract Infections</term><term>Tuberculosis</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Databases, Factual</term><term>Humans</term><term>Polymorphism, Single Nucleotide</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Bases de données factuelles</term><term>Humains</term><term>Polymorphisme de nucléotide simple</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p>Host genetic factors have frequently been implicated in respiratory infectious diseases, often with inconsistent results in replication studies. We identified 386 studies from the total of 24,823 studies identified in a systematic search of four bibliographic databases. We performed meta-analyses of studies on tuberculosis, influenza, respiratory syncytial virus, SARS-Coronavirus and pneumonia. One single-nucleotide polymorphism from <italic>IL4</italic> gene was significant for pooled respiratory infections (rs2070874; 1.66 [1.29–2.14]). We also detected an association of <italic>TLR2</italic> gene with tuberculosis (rs5743708; 3.19 [2.03–5.02]). Subset analyses identified <italic>CCL2</italic> as an additional risk factor for tuberculosis (rs1024611; OR = 0.79 [0.72–0.88]). The <italic>IL4</italic>-<italic>TLR2</italic>-<italic>CCL2</italic> axis could be a highly interesting target for translation towards clinical use. However, this conclusion is based on low credibility of evidence - almost 95% of all identified studies had strong risk of bias or confounding. Future studies must build upon larger-scale collaborations, but also strictly adhere to the highest evidence-based principles in study design, in order to reduce research waste and provide clinically translatable evidence.</p><sec><title>Electronic supplementary material</title><p>The online version of this article (doi:10.1038/srep16119) contains supplementary material, which is available to authorized users.</p></sec></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Fauci, As" uniqKey="Fauci A">AS Fauci</name></author><author><name sortKey="Morens, Dm" uniqKey="Morens D">DM Morens</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Fumagalli, M" uniqKey="Fumagalli M">M Fumagalli</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Morens, Dm" uniqKey="Morens D">DM Morens</name></author><author><name sortKey="Folkers, Gk" uniqKey="Folkers G">GK 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last="Kol I">Ivana Kol I</name><name sortKey="Polasek, Ozren" sort="Polasek, Ozren" uniqKey="Polasek O" first="Ozren" last="Polašek">Ozren Polašek</name></country><country name="Royaume-Uni"><noRegion><name sortKey="Theodoratou, Evropi" sort="Theodoratou, Evropi" uniqKey="Theodoratou E" first="Evropi" last="Theodoratou">Evropi Theodoratou</name></noRegion><name sortKey="Baillie, Kenneth J" sort="Baillie, Kenneth J" uniqKey="Baillie K" first="Kenneth J." last="Baillie">Kenneth J. Baillie</name><name sortKey="Baillie, Kenneth J" sort="Baillie, Kenneth J" uniqKey="Baillie K" first="Kenneth J." last="Baillie">Kenneth J. Baillie</name><name sortKey="Campbell, Harry" sort="Campbell, Harry" uniqKey="Campbell H" first="Harry" last="Campbell">Harry Campbell</name><name sortKey="Polasek, Ozren" sort="Polasek, Ozren" uniqKey="Polasek O" first="Ozren" last="Polašek">Ozren Polašek</name><name sortKey="Rudan, Igor" sort="Rudan, Igor" uniqKey="Rudan I" first="Igor" last="Rudan">Igor Rudan</name></country><country name="Pays-Bas"><noRegion><name sortKey="De Jong, Menno D" sort="De Jong, Menno D" uniqKey="De Jong M" first="Menno D." last="De Jong">Menno D. De Jong</name></noRegion></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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